Login   |   Regist

Biotechnol Bioeng. 2009 Mar;102(4):1161-9. Metabolic flux analysis of Shewanella spp. reveals evolutionary robustness in central carbon metabolism. Tang YJ, Martin HG, Dehal PS, et al.



Click on the "GO TO" button to display the flux map.

Font-size: Color: Global color
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 44 R02736+R01528+R00267+R00214
NADPH production rate Minium 3 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 45 R02736+R01528+R00267+R00214
NADPH production rate Minium 4 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 44 R02736+R01528+R00267+R00214
NADPH production rate Minium 2 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 67 R02736+R01528+R00267+R00214
NADPH production rate Minium 1 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 53 R02736+R01528+R00267+R00214
NADPH production rate Minium 4 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 56 R02736+R01528+R00267+R00214
NADPH production rate Minium 2 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 53 R02736+R01528+R00267+R00214
NADPH production rate Minium 4 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 44 R02736+R01528+R00267+R00214
NADPH production rate Minium 3 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 48 R02736+R01528+R00267+R00214
NADPH production rate Minium 2 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 93 R02736+R01528+R00267+R00214
NADPH production rate Minium 7 R02736+R01528
ATP production rate Maximum N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R00267+2.5*R08549-R00405+1.5*R00402+2.5*R00342
+2.5*R00214
ATP production rate Minium N/A -R01786-R04779+2.5*R01061+R01512+R00200+2.5*R00209
+2.5*R08549-R00405+1.5*R00402+2.5*R00342
NADPH production rate Maximum 86 R02736+R01528+R00267+R00214
NADPH production rate Minium 1 R02736+R01528
Growth Condition
Strains Shewanella MR1
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.23/h
Case-specific description The flux of central carbon metabolism in Shewanella MR1. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella MR4
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.28/h
Case-specific description The flux of central carbon metabolism in Shewanella MR4. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella MR7
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.29/h
Case-specific description The flux of central carbon metabolism in Shewanella MR7. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella SB
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.24/h
Case-specific description The flux of central carbon metabolism in Shewanella SB. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella CN
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.26/h
Case-specific description The flux of central carbon metabolism in Shewanella CN. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella W3
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.27/h
Case-specific description The flux of central carbon metabolism in Shewanella W3. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella ANA
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.28/h
Case-specific description The flux of central carbon metabolism in Shewanella ANA. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella PV4
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate 0.24/h
Case-specific description The flux of central carbon metabolism in Shewanella PV4. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains E.coli W3110
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate
Case-specific description The flux of central carbon metabolism in Shewanella E.coli W3110. Although the tested Shewanella species had slightly different growth rates and produced different amounts of acetate and pyruvate during early exponential growth,the relative intracellular metabolic flux distributions were remarkably similar.
Growth Condition
Strains Shewanella MR1 late
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate
Case-specific description The isotopomer data from proteinogenic amino acids in the late phase biomass.
Growth Condition
Strains E.coli W3110 late
Genotype
Culture medium The modified MR-1 defined medium.
Carbon source Lactate.
Growth rate
Case-specific description The isotopomer data from proteinogenic amino acids in the late phase biomass.
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Specific Rate (mmol g-1 h-1)
Source